Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938925.1_cds_XP_016483663.1_74757
CDS Infomation

[gene=LOC107804304] [db_xref=GeneID:107804304] [protein=probable beta-1,4-xylosyltransferase IRX10L] [protein_id=XP_016483663.1] [location=complement(join(4783..5296,5456..5697,5914..6302,9693..9798))] [gbkey=CDS]
Sequence

ATGAGGAATTTGCGATTGGGTTTTCTTTTGCTTCTTTATTTTGCTTTCCTTTTGGGAATT
GAAGCCCTCAAATTTCATAGAACCGAGCGTACCGAGAGAATCTCAGGTAGTGCCGGTGAT
GTCTTGGAAGATGATCCAGTTGGGAGGTTAAAAGTTTTTGTATATGAGCTTCCCAGCAAA
TACAACAAGAAAATTCTTCAGAAAGACCCACGATGTCTTAGCCACATGTTTGCTGCGGAG
ATCTATATGCATCGTTTCCTCTTATCTAGCCCTGTCCGAACCCTTAATCCCGGGGAAGCT
GATTGGTTCTACACCCCTGTTTATACCACTTGTGACCTGACACCAAATGGCCTTCCTTTA
CCCTTCAAGTCGCCACGAATGATGAGGAGTGCAATACAACTTATTGCTTCTAACTGGCCT
TATTGGAATAGGACAGAGGGGGCTGATCACTTCTTCATTGTCCCACACGATTTTGCTGCT
TGTTTTCATTATCAAGAGGAAAAAGCTATTGGGAGGGGAATTCTTCCATTGCTCCAACGT
GCAACTCTAGTTCAAACTTTTGGACAAAGAAATCATGTGTGTTTGAAGGATGGTTCAATT
ACAATTCCTCCCTATGCCCCTCCGCAGAAAATGCAGTCCCACTTCATCCCTCCAGATATT
CCACGATCCATCTTTGTTTACTTTCGTGGCTTGTTCTATGACGTAGGAAATGATCCAGAA
GGTGGTTACTATGCAAGAGGTGCACGGGCAGCAGTATGGGAGAACTTTAAGGACAATCCT
CTCTTTGATATTTCTACGGAACATCCAACTACCTACTATGAAGACATGCAGCGAGCCATC
TTTTGCTTGTGTCCACTTGGGTGGGCCCCGTGGAGTCCAAGATTGGTTGAAGCAGTTATA
TTCGGTTGCATCCCTGTTATTATTGCAGATGATATTGTCTTGCCATTTGCTGATGCAATC
CCCTGGGAAGAGATTGGTGTTTTTGTAGACGAGAAGGACGTTCCAAATTTGGATACTATA
CTCACTTCTATTCCACCTGAGGAAATATTGAGGAAGCAGAGATTGCTTGCCAACCCTTCA
ATGAAGCAGGCTATGTTATTTCCACAACCTGCACAACCAGGTGATGCTTTCCATCAAATA
TTGAATGGACTTGCTCGTAAACTGCCACACGATAGGAGTGTTTACTTGAGTCCTGGGGAG
AAGATCTTAAACTGGACTGCTGGTCCAATTGGTGACCTAAAACCTTGGTAA

Peptide Sequence

PEP ID

XP_016483663.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Nicotiana tabacum]
Sequence

MRNLRLGFLLLLYFAFLLGIEALKFHRTERTERISGSAGDVLEDDPVGRLKVFVYELPSK
YNKKILQKDPRCLSHMFAAEIYMHRFLLSSPVRTLNPGEADWFYTPVYTTCDLTPNGLPL
PFKSPRMMRSAIQLIASNWPYWNRTEGADHFFIVPHDFAACFHYQEEKAIGRGILPLLQR
ATLVQTFGQRNHVCLKDGSITIPPYAPPQKMQSHFIPPDIPRSIFVYFRGLFYDVGNDPE
GGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAIFCLCPLGWAPWSPRLVEAVI
FGCIPVIIADDIVLPFADAIPWEEIGVFVDEKDVPNLDTILTSIPPEEILRKQRLLANPS
MKQAMLFPQPAQPGDAFHQILNGLARKLPHDRSVYLSPGEKILNWTAGPIGDLKPW

Transcript Sequence

Gene sequence data has not been registered.